HMM Vesicle Analysis

What biophysical simulations can be analyzed?

This set of codes are primarily for simulations of vesicles (sphere-like lipid membranes).

Installation

Download the code and required software, with instructions here: Installation

How does this work?

Prepare the simulation as either a .pdb file or .gro/.trr file

• Data Preparation

Analyze the simulation

• Visualizing The Vesicle